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CHST12 carbohydrate sulfotransferase 12 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105571747, updated on 13-Mar-2024

Summary

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Gene symbol
CHST12
Gene description
carbohydrate sulfotransferase 12
See related
Ensembl:ENSCATG00000016078
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See CHST12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002954.1 (2518860..2551906, complement)

NW_012002954.1Genomic Context describing neighboring genes Neighboring gene LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Neighboring gene galectin-related inter-fiber protein Neighboring gene uncharacterized LOC105571748 Neighboring gene neugrin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002954.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002954.1 Reference Caty_1.0

    Range
    2518860..2551906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012029681.1 → XP_011885071.1  carbohydrate sulfotransferase 12

    See identical proteins and their annotated locations for XP_011885071.1

    UniProtKB/TrEMBL
    A0A2K5KVE7
    Related
    ENSCATP00000004653.1, ENSCATT00000018335.1
    Conserved Domains (1) summary
    pfam03567
    Location:160 → 405
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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