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LOC105564902 glycosyltransferase-like protein LARGE2 [ Vollenhovia emeryi ]

Gene ID: 105564902, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105564902
Gene description
glycosyltransferase-like protein LARGE2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vollenhovia emeryi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Vollenhovia
Orthologs
honey bee all
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Genomic context

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See LOC105564902 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current V.emery_V1.0 (GCF_000949405.1) Unplaced Scaffold NW_011967208.1 (129817..138882)

NW_011967208.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex subunit Pop2 Neighboring gene sushi domain containing 2 mesh Neighboring gene kekkon 5 Neighboring gene guanylate cyclase 1 soluble subunit alpha 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011967208.1 Unplaced Scaffold Reference V.emery_V1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase-like protein LARGE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vollenhovia emeryi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference V.emery_V1.0

Genomic

  1. NW_011967208.1 Reference V.emery_V1.0

    Range
    129817..138882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012017668.1 → XP_011873058.1  glycosyltransferase-like protein LARGE2 isoform X2

    Conserved Domains (2) summary
    cd06431
    Location:76 → 353
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:399 → 577
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_012017667.1 → XP_011873057.1  glycosyltransferase-like protein LARGE2 isoform X1

    Conserved Domains (2) summary
    pfam13896
    Location:399 → 669
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl11394
    Location:76 → 353
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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