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Pgant9 polypeptide N-acetylgalactosaminyltransferase 9 [ Vollenhovia emeryi ]

Gene ID: 105561116, updated on 22-May-2024

Summary

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Gene symbol
Pgant9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Vollenhovia emeryi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Vollenhovia
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current V.emery_V1.0 (GCF_000949405.1) Unplaced Scaffold NW_011967155.1 (500614..751452, complement)

NW_011967155.1Genomic Context describing neighboring genes Neighboring gene alpha-amylase A-like Neighboring gene mediator of RNA polymerase II transcription subunit 15-like Neighboring gene serine-enriched protein Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene uncharacterized LOC105561117 Neighboring gene uncharacterized LOC105561126

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011967155.1 Unplaced Scaffold Reference V.emery_V1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vollenhovia emeryi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference V.emery_V1.0

Genomic

  1. NW_011967155.1 Reference V.emery_V1.0

    Range
    500614..751452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012010817.1 → XP_011866207.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_011866207.1

    Conserved Domains (4) summary
    cd02510
    Location:172 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:172 → 441
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:482 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:480 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_012010820.1 → XP_011866210.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    Conserved Domains (4) summary
    cd02510
    Location:172 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:172 → 441
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:482 → 599
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:480 → 597
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_012010816.1 → XP_011866206.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_011866206.1

    Conserved Domains (4) summary
    cd02510
    Location:172 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:172 → 441
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:482 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:480 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_012010818.1 → XP_011866208.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_011866208.1

    Conserved Domains (4) summary
    cd02510
    Location:172 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:172 → 441
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:482 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:480 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_012010819.1 → XP_011866209.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    See identical proteins and their annotated locations for XP_011866209.1

    Conserved Domains (4) summary
    cd02510
    Location:172 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:172 → 441
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:482 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:480 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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