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ICAM5 intercellular adhesion molecule 5 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105550110, updated on 13-Mar-2024

Summary

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Gene symbol
ICAM5
Gene description
intercellular adhesion molecule 5
See related
Ensembl:ENSMLEG00000040636
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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See ICAM5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012099432.1 (678290..685485)

NW_012099432.1Genomic Context describing neighboring genes Neighboring gene intercellular adhesion molecule 1 Neighboring gene intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) Neighboring gene zinc finger GATA like protein 1 Neighboring gene ferredoxin 2 Neighboring gene ribonucleoprotein, PTB binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012099432.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intercellular adhesion molecule 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012099432.1 Reference Mleu.le_1.0

    Range
    678290..685485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011995003.1 → XP_011850393.1  intercellular adhesion molecule 5

    UniProtKB/TrEMBL
    A0A2K5ZYM0
    Related
    ENSMLEP00000032877.1, ENSMLET00000056456.1
    Conserved Domains (6) summary
    cd05755
    Location:120 → 219
    Ig2_ICAM-1_like; Second immunoglobulin (Ig)-like domain of intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar proteins
    smart00408
    Location:761 → 821
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:759 → 831
    IG_like; Immunoglobulin like
    pfam03921
    Location:31 → 103
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    pfam13895
    Location:325 → 404
    Ig_2; Immunoglobulin domain
    cl11960
    Location:512 → 570
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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