U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SPTLC2 serine palmitoyltransferase long chain base subunit 2 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105545359, updated on 19-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
SPTLC2
Gene description
serine palmitoyltransferase long chain base subunit 2
See related
Ensembl:ENSMLEG00000028697
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SPTLC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012103432.1 (1666853..1792185)

NW_012103432.1Genomic Context describing neighboring genes Neighboring gene SRA stem-loop interacting RNA binding protein Neighboring gene SNW domain containing 1 Neighboring gene alkB homolog 1, histone H2A dioxygenase Neighboring gene isthmin 2 Neighboring gene activator of HSP90 ATPase activity 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012103432.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine palmitoyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012103432.1 Reference Mleu.le_1.0

    Range
    1666853..1792185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011988275.1 → XP_011843665.1  serine palmitoyltransferase 2

    UniProtKB/TrEMBL
    A0A2K5Y0G8
    Related
    ENSMLEP00000009015.1, ENSMLET00000032412.1
    Conserved Domains (1) summary
    PLN02483
    Location:65 → 540
    PLN02483; serine palmitoyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.