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SDC3 syndecan 3 [ Mandrillus leucophaeus (drill) ]

Gene ID: 105535032, updated on 13-Mar-2024

Summary

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Gene symbol
SDC3
Gene description
syndecan 3
See related
Ensembl:ENSMLEG00000032383
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
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Genomic context

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See SDC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012101377.1 (599023..610292, complement)

NW_012101377.1Genomic Context describing neighboring genes Neighboring gene lysosomal protein transmembrane 5 Neighboring gene uncharacterized LOC105535031 Neighboring gene pumilio RNA binding family member 1 Neighboring gene sodium/potassium transporting ATPase interacting 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012101377.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012101377.1 Reference Mleu.le_1.0

    Range
    599023..610292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011973985.1 → XP_011829375.1  syndecan-3

    UniProtKB/TrEMBL
    A0A2K5YLD8
    Related
    ENSMLEP00000016366.1, ENSMLET00000039833.1
    Conserved Domains (1) summary
    pfam01034
    Location:357 → 398
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

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