U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SC5D sterol-C5-desaturase [ Mandrillus leucophaeus (drill) ]

Gene ID: 105528269, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SC5D
Gene description
sterol-C5-desaturase
See related
Ensembl:ENSMLEG00000036490
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SC5D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012107697.1 (4386172..4407633)

NW_012107697.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor E like Neighboring gene tectorin alpha Neighboring gene sortilin related receptor 1 Neighboring gene uncharacterized LOC105528274

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012107697.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process via lathosterol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lathosterol oxidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012107697.1 Reference Mleu.le_1.0

    Range
    4386172..4407633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011964983.1 → XP_011820373.1  lathosterol oxidase isoform X2

    See identical proteins and their annotated locations for XP_011820373.1

    UniProtKB/TrEMBL
    A0A2K5Z9X8
    Conserved Domains (2) summary
    COG3000
    Location:34 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:123 → 253
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  2. XM_011964982.1 → XP_011820372.1  lathosterol oxidase isoform X1

    Conserved Domains (2) summary
    COG3000
    Location:41 → 264
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:130 → 260
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  3. XM_011964985.1 → XP_011820375.1  lathosterol oxidase isoform X2

    See identical proteins and their annotated locations for XP_011820375.1

    UniProtKB/TrEMBL
    A0A2K5Z9X8
    Conserved Domains (2) summary
    COG3000
    Location:34 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:123 → 253
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  4. XM_011964984.1 → XP_011820374.1  lathosterol oxidase isoform X2

    See identical proteins and their annotated locations for XP_011820374.1

    UniProtKB/TrEMBL
    A0A2K5Z9X8
    Related
    ENSMLEP00000024624.1, ENSMLET00000048149.1
    Conserved Domains (2) summary
    COG3000
    Location:34 → 257
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:123 → 253
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.