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LGALS1 galectin 1 [ Colobus angolensis palliatus ]

Gene ID: 105527800, updated on 13-Mar-2024

Summary

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Gene symbol
LGALS1
Gene description
galectin 1
See related
Ensembl:ENSCANG00000038935
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See LGALS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012120154.1 (3916616..3932271, complement)

NW_012120154.1Genomic Context describing neighboring genes Neighboring gene TRIO and F-actin binding protein Neighboring gene nucleolar protein 12 Neighboring gene pyridoxal phosphatase Neighboring gene SH3 domain binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012120154.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012120154.1 Reference Cang.pa_1.0

    Range
    3916616..3932271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011964273.1 → XP_011819663.1  galectin-1 isoform X2

    See identical proteins and their annotated locations for XP_011819663.1

    UniProtKB/TrEMBL
    A0A2K5JP13
    Conserved Domains (1) summary
    smart00276
    Location:11 → 134
    GLECT; Galectin

  2. XM_011964271.1 → XP_011819661.1  galectin-1 isoform X2

    See identical proteins and their annotated locations for XP_011819661.1

    UniProtKB/TrEMBL
    A0A2K5JP13
    Related
    ENSCANP00000030552.1, ENSCANT00000053759.1
    Conserved Domains (1) summary
    smart00276
    Location:11 → 134
    GLECT; Galectin

  3. XM_011964274.1 → XP_011819664.1  galectin-1 isoform X3

    See identical proteins and their annotated locations for XP_011819664.1

    Conserved Domains (1) summary
    smart00276
    Location:11 → 127
    GLECT; Galectin

  4. XM_011964270.1 → XP_011819660.1  galectin-1 isoform X1

    Conserved Domains (1) summary
    smart00276
    Location:54 → 177
    GLECT; Galectin
Nucleotide Protein
Heading Accession and Version

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