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HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Colobus angolensis palliatus ]

Gene ID: 105527081, updated on 13-Mar-2024

Summary

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Gene symbol
HSD17B12
Gene description
hydroxysteroid 17-beta dehydrogenase 12
See related
Ensembl:ENSCANG00000032615
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See HSD17B12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012119710.1 (715446..894415)

NW_012119710.1Genomic Context describing neighboring genes Neighboring gene C-terminal-binding protein 2 pseudogene Neighboring gene uncharacterized LOC105527077 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene prohibitin-like Neighboring gene SEC14-like protein 1 pseudogene Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene chromosome unknown open reading frame, human C11orf96

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012119710.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012119710.1 Reference Cang.pa_1.0

    Range
    715446..894415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011963265.1 → XP_011818655.1  very-long-chain 3-oxoacyl-CoA reductase isoform X1

    UniProtKB/TrEMBL
    A0A2K5IP13
    Related
    ENSCANP00000018325.1, ENSCANT00000041280.1
    Conserved Domains (3) summary
    cd05356
    Location:50 → 289
    17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
    COG0300
    Location:50 → 299
    DltE; Short-chain dehydrogenase [General function prediction only]
    cl21454
    Location:3 → 83
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. XM_011963266.1 → XP_011818656.1  very-long-chain 3-oxoacyl-CoA reductase isoform X2

    UniProtKB/TrEMBL
    A0A2K5IP13, A0A2K5IP82
    Related
    ENSCANP00000018321.1, ENSCANT00000041276.1
    Conserved Domains (3) summary
    cd05356
    Location:50 → 253
    17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
    COG0300
    Location:50 → 263
    DltE; Short-chain dehydrogenase [General function prediction only]
    cl21454
    Location:3 → 83
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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