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PIGA phosphatidylinositol glycan anchor biosynthesis class A [ Colobus angolensis palliatus ]

Gene ID: 105523126, updated on 13-Mar-2024

Summary

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Gene symbol
PIGA
Gene description
phosphatidylinositol glycan anchor biosynthesis class A
See related
Ensembl:ENSCANG00000012496
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See PIGA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117933.1 (2380129..2395922, complement)

NW_012117933.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 9 Neighboring gene ankyrin repeat and SOCS box containing 11 Neighboring gene vascular endothelial growth factor D Neighboring gene pirin Neighboring gene BMX non-receptor tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117933.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol N-acetylglucosaminyltransferase subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117933.1 Reference Cang.pa_1.0

    Range
    2380129..2395922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011957882.1 → XP_011813272.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X2

    UniProtKB/TrEMBL
    A0A2K5HGM0
    Related
    ENSCANP00000003486.1, ENSCANT00000013887.1
    Conserved Domains (2) summary
    COG0438
    Location:5 → 167
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cl10013
    Location:5 → 198
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  2. XM_011957880.1 → XP_011813270.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    See identical proteins and their annotated locations for XP_011813270.1

    UniProtKB/TrEMBL
    A0A2K5HGQ3
    Conserved Domains (2) summary
    cd03796
    Location:34 → 432
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
    COG0438
    Location:34 → 401
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]

  3. XM_011957881.1 → XP_011813271.1  phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1

    See identical proteins and their annotated locations for XP_011813271.1

    UniProtKB/TrEMBL
    A0A2K5HGQ3
    Related
    ENSCANP00000003510.1, ENSCANT00000013983.1
    Conserved Domains (2) summary
    cd03796
    Location:34 → 432
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
    COG0438
    Location:34 → 401
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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