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TARS3 threonyl-tRNA synthetase 3 [ Colobus angolensis palliatus ]

Gene ID: 105522964, updated on 13-Mar-2024

Summary

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Gene symbol
TARS3
Gene description
threonyl-tRNA synthetase 3
See related
Ensembl:ENSCANG00000035438
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Also known as
TARSL2
Orthologs
human mouse all
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Genomic context

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See TARS3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012112253.1 (1731324..1812682, complement)

NW_012112253.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 6 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene TM2 domain containing 3 Neighboring gene uncharacterized LOC105523336 Neighboring gene WASP homolog-associated protein with actin, membranes and microtubules-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012112253.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable threonine--tRNA ligase 2, cytoplasmic
Names
threonyl-tRNA synthetase like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012112253.1 Reference Cang.pa_1.0

    Range
    1731324..1812682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011957648.1 → XP_011813038.1  probable threonine--tRNA ligase 2, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A2K5J5K6
    Conserved Domains (5) summary
    cd01667
    Location:47 → 108
    TGS_ThrRS_N; TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase, and ...
    PLN02908
    Location:4 → 585
    PLN02908; threonyl-tRNA synthetase
    smart00863
    Location:119 → 166
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cd00771
    Location:190 → 487
    ThrRS_core; Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent ...
    cd00860
    Location:487 → 578
    ThrRS_anticodon; ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is ...

  2. XM_011957639.1 → XP_011813029.1  probable threonine--tRNA ligase 2, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A2K5J5K6
    Related
    ENSCANP00000024077.1, ENSCANT00000047072.1
    Conserved Domains (5) summary
    cd01667
    Location:47 → 108
    TGS_ThrRS_N; TGS _ThrRS_N: ThrRS (threonyl-tRNA Synthetase) is a class II tRNA synthetase that couples threonine to its cognate tRNA. In addition to its catalytic and anticodon-binding domains, ThrRS has an N-terminal TGS domain, named after the ThrRS, GTPase, and ...
    PLN02908
    Location:4 → 680
    PLN02908; threonyl-tRNA synthetase
    smart00863
    Location:214 → 261
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cd00771
    Location:285 → 582
    ThrRS_core; Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent ...
    cd00860
    Location:582 → 673
    ThrRS_anticodon; ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is ...
Nucleotide Protein
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