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NGLY1 N-glycanase 1 [ Colobus angolensis palliatus ]

Gene ID: 105521888, updated on 13-Mar-2024

Summary

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Gene symbol
NGLY1
Gene description
N-glycanase 1
See related
Ensembl:ENSCANG00000035888
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See NGLY1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117500.1 (1702913..1776698)

NW_012117500.1Genomic Context describing neighboring genes Neighboring gene ribulose-phosphate 3-epimerase-like Neighboring gene uncharacterized LOC105521887 Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial Neighboring gene cysteine-rich protein 1 pseudogene Neighboring gene DNA topoisomerase II beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117500.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117500.1 Reference Cang.pa_1.0

    Range
    1702913..1776698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011956235.1 → XP_011811625.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X1

    UniProtKB/TrEMBL
    A0A2K5J863
    Related
    ENSCANP00000024956.1, ENSCANT00000047955.1
    Conserved Domains (5) summary
    cd10459
    Location:19 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    COG1305
    Location:292 → 353
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam01841
    Location:274 → 353
    Transglut_core; Transglutaminase-like superfamily
    pfam03835
    Location:337 → 390
    Rad4; Rad4 transglutaminase-like domain
    pfam04721
    Location:456 → 650
    PAW; PNGase C-terminal domain, mannose-binding module PAW

  2. XM_011956236.1 → XP_011811626.1  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform X2

    UniProtKB/TrEMBL
    A0A2K5J867
    Related
    ENSCANP00000024961.1, ENSCANT00000047960.1
    Conserved Domains (5) summary
    cd10459
    Location:19 → 109
    PUB_PNGase; PNGase/UBA or UBX (PUB) domain of the P97 adaptor protein Peptide:N-glycanase (PNGase)
    COG1305
    Location:292 → 353
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam01841
    Location:274 → 353
    Transglut_core; Transglutaminase-like superfamily
    pfam03835
    Location:337 → 390
    Rad4; Rad4 transglutaminase-like domain
    cl10509
    Location:456 → 537
    PAW; PNGase C-terminal domain, mannose-binding module PAW
Nucleotide Protein
Heading Accession and Version

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