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B3GALT5 beta-1,3-galactosyltransferase 5 [ Colobus angolensis palliatus ]

Gene ID: 105520365, updated on 13-Mar-2024

Summary

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Gene symbol
B3GALT5
Gene description
beta-1,3-galactosyltransferase 5
See related
Ensembl:ENSCANG00000029599
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See B3GALT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117154.1 (3146222..3249963)

NW_012117154.1Genomic Context describing neighboring genes Neighboring gene small cell adhesion glycoprotein pseudogene Neighboring gene lebercilin LCA5 like Neighboring gene SH3 domain binding glutamate rich protein Neighboring gene putative uncharacterized protein B3GALT5-AS1 Neighboring gene immunoglobulin superfamily member 5 Neighboring gene Purkinje cell protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117154.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117154.1 Reference Cang.pa_1.0

    Range
    3146222..3249963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011954049.1 → XP_011809439.1  beta-1,3-galactosyltransferase 5 isoform X2

    See identical proteins and their annotated locations for XP_011809439.1

    Conserved Domains (1) summary
    cl21608
    Location:74 → 262
    Galactosyl_T; Galactosyltransferase

  2. XM_011954051.1 → XP_011809441.1  beta-1,3-galactosyltransferase 5 isoform X2

    See identical proteins and their annotated locations for XP_011809441.1

    Conserved Domains (1) summary
    cl21608
    Location:74 → 262
    Galactosyl_T; Galactosyltransferase

  3. XM_011954048.1 → XP_011809438.1  beta-1,3-galactosyltransferase 5 isoform X1

    UniProtKB/TrEMBL
    A0A2K5I6Z6
    Related
    ENSCANP00000012399.1, ENSCANT00000035308.1
    Conserved Domains (1) summary
    cl21608
    Location:78 → 266
    Galactosyl_T; Galactosyltransferase

  4. XM_011954050.1 → XP_011809440.1  beta-1,3-galactosyltransferase 5 isoform X2

    See identical proteins and their annotated locations for XP_011809440.1

    Conserved Domains (1) summary
    cl21608
    Location:74 → 262
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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