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PIGN phosphatidylinositol glycan anchor biosynthesis class N [ Colobus angolensis palliatus ]

Gene ID: 105520036, updated on 13-Mar-2024

Summary

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Gene symbol
PIGN
Gene description
phosphatidylinositol glycan anchor biosynthesis class N
See related
Ensembl:ENSCANG00000035008
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See PIGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012117032.1 (2023774..2174453)

NW_012117032.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 11a Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene ring finger protein 152 Neighboring gene cadherin 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012117032.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012117032.1 Reference Cang.pa_1.0

    Range
    2023774..2174453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011953602.1 → XP_011808992.1  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011808992.1

    UniProtKB/TrEMBL
    A0A2K5J9X8, A0A2K5JAF2
    Related
    ENSCANP00000025723.1, ENSCANT00000048728.1
    Conserved Domains (3) summary
    COG1524
    Location:7 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  2. XM_011953604.1 → XP_011808994.1  GPI ethanolamine phosphate transferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011808994.1

    UniProtKB/TrEMBL
    A0A2K5J9X8, A0A2K5JAF2
    Related
    ENSCANP00000025780.1, ENSCANT00000048785.1
    Conserved Domains (3) summary
    COG1524
    Location:7 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  3. XM_011953605.1 → XP_011808995.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5JAF2
    Conserved Domains (2) summary
    pfam04987
    Location:395 → 848
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:7 → 309
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
Nucleotide Protein
Heading Accession and Version

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