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SGPP2 sphingosine-1-phosphate phosphatase 2 [ Colobus angolensis palliatus ]

Gene ID: 105518783, updated on 13-Mar-2024

Summary

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Gene symbol
SGPP2
Gene description
sphingosine-1-phosphate phosphatase 2
See related
Ensembl:ENSCANG00000027831
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See SGPP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012116599.1 (1885204..1987762)

NW_012116599.1Genomic Context describing neighboring genes Neighboring gene cancer/testis antigen 75-like Neighboring gene CCDC140 long non-coding RNA Neighboring gene homeobox protein NANOG pseudogene Neighboring gene overexpressed in colon carcinoma 1 protein-like Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene monoacylglycerol O-acyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012116599.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012116599.1 Reference Cang.pa_1.0

    Range
    1885204..1987762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011951905.1 → XP_011807295.1  sphingosine-1-phosphate phosphatase 2

    UniProtKB/TrEMBL
    A0A2K5HWS5
    Related
    ENSCANP00000008824.1, ENSCANT00000031690.1
    Conserved Domains (2) summary
    COG0671
    Location:31 → 108
    PgpB; Membrane-associated phospholipid phosphatase [Lipid transport and metabolism]
    cd03388
    Location:1 → 105
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

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