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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Colobus angolensis palliatus ]

Gene ID: 105517660, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
See related
Ensembl:ENSCANG00000036461
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012116311.1 (1031243..1281569)

NW_012116311.1Genomic Context describing neighboring genes Neighboring gene TTK protein kinase Neighboring gene adenylate kinase 4, mitochondrial pseudogene Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene citrate synthase, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012116311.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012116311.1 Reference Cang.pa_1.0

    Range
    1031243..1281569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011950278.1 → XP_011805668.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011805668.1

    UniProtKB/TrEMBL
    A0A2K5JB87
    Related
    ENSCANP00000026075.1, ENSCANT00000049083.1
    Conserved Domains (3) summary
    cd07036
    Location:75 → 241
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    PTZ00182
    Location:38 → 390
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
    pfam02780
    Location:262 → 381
    Transketolase_C; Transketolase, C-terminal domain

  2. XM_011950279.1 → XP_011805669.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011805669.1

    UniProtKB/TrEMBL
    A0A2K5JB87
    Conserved Domains (3) summary
    cd07036
    Location:75 → 241
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    PTZ00182
    Location:38 → 390
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
    pfam02780
    Location:262 → 381
    Transketolase_C; Transketolase, C-terminal domain

  3. XM_011950280.1 → XP_011805670.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X2

    Conserved Domains (1) summary
    PTZ00182
    Location:1 → 320
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
Nucleotide Protein
Heading Accession and Version

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