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H3F3A H3 histone, family 3A [ Colobus angolensis palliatus ]

Gene ID: 105516685, updated on 13-Mar-2024

Summary

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Gene symbol
H3F3A
Gene description
H3 histone, family 3A
See related
Ensembl:ENSCANG00000040291
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See H3F3A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012116132.1 (871981..881872)

NW_012116132.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene Neighboring gene SDE2 telomere maintenance homolog Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene Mix paired-like homeobox

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012116132.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H3.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012116132.1 Reference Cang.pa_1.0

    Range
    871981..881872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011948955.1 → XP_011804345.1  histone H3.3 isoform X2

    See identical proteins and their annotated locations for XP_011804345.1

    Conserved Domains (1) summary
    cl23735
    Location:1 → 94
    H4; Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic nucleosome core; along with H3, it plays a central role in nucleosome formation; histones bind to DNA and wrap the genetic material into "beads on a string" in ...

  2. XM_011948951.1 → XP_011804341.1  histone H3.3 isoform X1

    See identical proteins and their annotated locations for XP_011804341.1

    UniProtKB/TrEMBL
    A0A2K5HAM1, A0A2K5JWR5
    Related
    ENSCANP00000033303.1, ENSCANT00000056530.1
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional

  3. XM_011948954.1 → XP_011804344.1  histone H3.3 isoform X1

    See identical proteins and their annotated locations for XP_011804344.1

    UniProtKB/TrEMBL
    A0A2K5HAM1, A0A2K5JWR5
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional

  4. XM_011948953.1 → XP_011804343.1  histone H3.3 isoform X1

    See identical proteins and their annotated locations for XP_011804343.1

    UniProtKB/TrEMBL
    A0A2K5HAM1, A0A2K5JWR5
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional

  5. XM_011948952.1 → XP_011804342.1  histone H3.3 isoform X1

    See identical proteins and their annotated locations for XP_011804342.1

    UniProtKB/TrEMBL
    A0A2K5HAM1, A0A2K5JWR5
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional
Nucleotide Protein
Heading Accession and Version

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