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PNPLA6 patatin like phospholipase domain containing 6 [ Colobus angolensis palliatus ]

Gene ID: 105512903, updated on 13-Mar-2024

Summary

Gene symbol
PNPLA6
Gene description
patatin like phospholipase domain containing 6
See related
Ensembl:ENSCANG00000040938
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
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Genomic context

See PNPLA6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115377.1 (5007303..5035966)

NW_012115377.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 11 gamma Neighboring gene stabilizer of axonemal microtubules 5 Neighboring gene zinc finger protein 358 Neighboring gene mucolipin TRP cation channel 1 Neighboring gene calmodulin regulated spectrin associated protein family member 3 Neighboring gene XPA binding protein 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_012115377.1 Unplaced Scaffold Reference Cang.pa_1.0

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012115377.1 Reference Cang.pa_1.0

    Range
    5007303..5035966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011943565.1XP_011798955.1  neuropathy target esterase isoform X1

    UniProtKB/TrEMBL
    A0A2K5K1K3, A0A2K5K1N3
    Related
    ENSCANP00000034976.1, ENSCANT00000058211.1
    Conserved Domains (4) summary
    cd07225
    Location:9161221
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:141283
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:9211205
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:587695
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
  2. XM_011943566.1XP_011798956.1  neuropathy target esterase isoform X2

    UniProtKB/TrEMBL
    A0A2K5K1N3
    Related
    ENSCANP00000035006.1, ENSCANT00000058241.1
    Conserved Domains (4) summary
    cd07225
    Location:9151220
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    COG0664
    Location:141283
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:9201204
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:587695
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...