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PYGM glycogen phosphorylase, muscle associated [ Colobus angolensis palliatus ]

Gene ID: 105512199, updated on 13-Mar-2024

Summary

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Gene symbol
PYGM
Gene description
glycogen phosphorylase, muscle associated
See related
Ensembl:ENSCANG00000043047
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See PYGM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115266.1 (5405757..5420496)

NW_012115266.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase kinase 2 Neighboring gene splicing factor 1 Neighboring gene RAS guanyl releasing protein 2 Neighboring gene neurexin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012115266.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, muscle form
Names
phosphorylase, glycogen, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012115266.1 Reference Cang.pa_1.0

    Range
    5405757..5420496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011942564.1 → XP_011797954.1  glycogen phosphorylase, muscle form isoform X1

    UniProtKB/TrEMBL
    A0A2K5KCC2, A0A2K5KCD7
    Related
    ENSCANP00000038742.1, ENSCANT00000062000.1
    Conserved Domains (2) summary
    cd04300
    Location:29 → 828
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:32 → 828
    P_ylase; glycogen/starch/alpha-glucan phosphorylases

  2. XM_011942566.1 → XP_011797956.1  glycogen phosphorylase, muscle form isoform X3

    UniProtKB/TrEMBL
    A0A2K5KCC7, A0A2K5KCD7
    Related
    ENSCANP00000038746.1, ENSCANT00000062004.1
    Conserved Domains (2) summary
    cd04300
    Location:29 → 740
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:32 → 740
    P_ylase; glycogen/starch/alpha-glucan phosphorylases

  3. XM_011942565.1 → XP_011797955.1  glycogen phosphorylase, muscle form isoform X2

    UniProtKB/TrEMBL
    A0A2K5KCD7
    Conserved Domains (2) summary
    cd04300
    Location:29 → 794
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:32 → 794
    P_ylase; glycogen/starch/alpha-glucan phosphorylases
Nucleotide Protein
Heading Accession and Version

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