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SCD5 stearoyl-CoA desaturase 5 [ Colobus angolensis palliatus ]

Gene ID: 105511625, updated on 13-Mar-2024

Summary

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Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
See related
Ensembl:ENSCANG00000035375
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See SCD5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115156.1 (4604669..4793146, complement)

NW_012115156.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit NDUFA4 Neighboring gene tyrosine-protein phosphatase non-receptor type 11 pseudogene Neighboring gene SEC31 homolog A, COPII coat complex component Neighboring gene uncharacterized LOC105511602 Neighboring gene THAP domain containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012115156.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012115156.1 Reference Cang.pa_1.0

    Range
    4604669..4793146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011941798.1 → XP_011797188.1  stearoyl-CoA desaturase 5

    UniProtKB/TrEMBL
    A0A2K5J567
    Related
    ENSCANP00000023937.1, ENSCANT00000046931.1
    Conserved Domains (1) summary
    cd03505
    Location:71 → 264
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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