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AARSD1 alanyl-tRNA synthetase domain containing 1 [ Colobus angolensis palliatus ]

Gene ID: 105502977, updated on 13-Mar-2024

Summary

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Gene symbol
AARSD1
Gene description
alanyl-tRNA synthetase domain containing 1
See related
Ensembl:ENSCANG00000041605
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See AARSD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012122154.1 (315559..329721)

NW_012122154.1Genomic Context describing neighboring genes Neighboring gene RUN domain containing 1 Neighboring gene RUN domain-containing protein 1-like Neighboring gene prostaglandin E synthase 3 like Neighboring gene telomerase reverse transcriptase pseudogene Neighboring gene glucose-6-phosphatase catalytic subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012122154.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Ser-tRNA(Ala) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanyl-tRNA editing protein Aarsd1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012122154.1 Reference Cang.pa_1.0

    Range
    315559..329721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011929666.1 → XP_011785056.1  alanyl-tRNA editing protein Aarsd1

    UniProtKB/TrEMBL
    A0A2K5K419, A0A2K5K453
    Related
    ENSCANP00000035827.1, ENSCANT00000059072.1
    Conserved Domains (2) summary
    COG2872
    Location:1 → 247
    AlaX; Ser-tRNA(Ala) deacylase AlaX (editing enzyme) [Translation, ribosomal structure and biogenesis]
    cl08469
    Location:42 → 230
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
Nucleotide Protein
Heading Accession and Version

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