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DEGS1 delta 4-desaturase, sphingolipid 1 [ Colobus angolensis palliatus ]

Gene ID: 105502833, updated on 13-Mar-2024

Summary

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Gene symbol
DEGS1
Gene description
delta 4-desaturase, sphingolipid 1
See related
Ensembl:ENSCANG00000030454
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See DEGS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012121932.1 (11519464..11523345)

NW_012121932.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA-associated Sm-like protein LSm2 Neighboring gene F-box protein 28 Neighboring gene nuclear VCP like Neighboring gene cornichon family member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012121932.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingolipid delta(4)-desaturase DES1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012121932.1 Reference Cang.pa_1.0

    Range
    11519464..11523345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011929504.1 → XP_011784894.1  sphingolipid delta(4)-desaturase DES1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5IBM3
    Conserved Domains (1) summary
    cl00615
    Location:1 → 239
    Membrane-FADS-like; The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins. They are present in all groups of organisms with the ...

  2. XM_011929503.1 → XP_011784893.1  sphingolipid delta(4)-desaturase DES1 isoform X1

    UniProtKB/TrEMBL
    A0A2K5IBM3
    Related
    ENSCANP00000014030.1, ENSCANT00000036950.1
    Conserved Domains (2) summary
    cd03508
    Location:1 → 279
    Delta4-sphingolipid-FADS-like; The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase ...
    pfam00487
    Location:32 → 256
    FA_desaturase; Fatty acid desaturase
Nucleotide Protein
Heading Accession and Version

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