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PIGT phosphatidylinositol glycan anchor biosynthesis class T [ Colobus angolensis palliatus ]

Gene ID: 105502437, updated on 13-Mar-2024

Summary

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Gene symbol
PIGT
Gene description
phosphatidylinositol glycan anchor biosynthesis class T
See related
Ensembl:ENSCANG00000034024
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See PIGT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012121820.1 (8217432..8227634, complement)

NW_012121820.1Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor, Kunitz type 3 Neighboring gene WAP four-disulfide core domain 2 Neighboring gene dysbindin domain containing 2 Neighboring gene SYS1 golgi trafficking protein Neighboring gene TP53 target 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012121820.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-T

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012121820.1 Reference Cang.pa_1.0

    Range
    8217432..8227634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011928934.1 → XP_011784324.1  GPI transamidase component PIG-T isoform X4

    UniProtKB/TrEMBL
    A0A2K5IXC3, A0A2K5IXK3
    Related
    ENSCANP00000021364.1, ENSCANT00000044339.1
    Conserved Domains (1) summary
    pfam04113
    Location:63 → 463
    Gpi16; Gpi16 subunit, GPI transamidase component

  2. XM_011928932.1 → XP_011784322.1  GPI transamidase component PIG-T isoform X2

    UniProtKB/TrEMBL
    A0A2K5IXE5, A0A2K5IXK3
    Related
    ENSCANP00000021353.1, ENSCANT00000044328.1
    Conserved Domains (1) summary
    pfam04113
    Location:32 → 509
    Gpi16; Gpi16 subunit, GPI transamidase component

  3. XM_011928933.1 → XP_011784323.1  GPI transamidase component PIG-T isoform X3

    UniProtKB/TrEMBL
    A0A2K5IX61, A0A2K5IXB9
    Related
    ENSCANP00000021359.1, ENSCANT00000044334.1
    Conserved Domains (1) summary
    pfam04113
    Location:32 → 498
    Gpi16; Gpi16 subunit, GPI transamidase component

  4. XM_011928931.1 → XP_011784321.1  GPI transamidase component PIG-T isoform X1

    UniProtKB/TrEMBL
    A0A2K5IX61, A0A2K5IXU9
    Related
    ENSCANP00000021342.1, ENSCANT00000044317.1
    Conserved Domains (1) summary
    pfam04113
    Location:32 → 565
    Gpi16; Gpi16 subunit, GPI transamidase component

  5. XM_011928936.1 → XP_011784326.1  GPI transamidase component PIG-T isoform X5

    See identical proteins and their annotated locations for XP_011784326.1

    UniProtKB/TrEMBL
    A0A2K5IXP0
    Related
    ENSCANP00000021443.1, ENSCANT00000044418.1
    Conserved Domains (1) summary
    pfam04113
    Location:2 → 303
    Gpi16; Gpi16 subunit, GPI transamidase component

  6. XM_011928935.1 → XP_011784325.1  GPI transamidase component PIG-T isoform X5

    See identical proteins and their annotated locations for XP_011784325.1

    UniProtKB/TrEMBL
    A0A2K5IXP0
    Conserved Domains (1) summary
    pfam04113
    Location:2 → 303
    Gpi16; Gpi16 subunit, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

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