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CTSA cathepsin A [ Colobus angolensis palliatus ]

Gene ID: 105502413, updated on 13-Mar-2024

Summary

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Gene symbol
CTSA
Gene description
cathepsin A
See related
Ensembl:ENSCANG00000012993
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See CTSA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012121820.1 (7740829..7748397, complement)

NW_012121820.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 335 Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene phospholipid transfer protein Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene spermatogenesis associated 25 Neighboring gene zinc finger SWIM-type containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012121820.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal protective protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012121820.1 Reference Cang.pa_1.0

    Range
    7740829..7748397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011928887.1 → XP_011784277.1  lysosomal protective protein isoform X1

    UniProtKB/TrEMBL
    A0A2K5HHF0, A0A2K5HHM8
    Related
    ENSCANP00000003782.1, ENSCANT00000014882.1
    Conserved Domains (1) summary
    pfam00450
    Location:53 → 488
    Peptidase_S10; Serine carboxypeptidase

  2. XM_011928889.1 → XP_011784279.1  lysosomal protective protein isoform X3

    UniProtKB/TrEMBL
    A0A2K5HHM8
    Conserved Domains (1) summary
    pfam00450
    Location:35 → 470
    Peptidase_S10; Serine carboxypeptidase

  3. XM_011928888.1 → XP_011784278.1  lysosomal protective protein isoform X2

    UniProtKB/TrEMBL
    A0A2K5HHM8
    Conserved Domains (1) summary
    pfam00450
    Location:53 → 479
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version

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