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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Colobus angolensis palliatus ]

Gene ID: 105501633, updated on 13-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
Ensembl:ENSCANG00000037804
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012121043.1 (12215262..12268422)

NW_012121043.1Genomic Context describing neighboring genes Neighboring gene coproporphyrinogen oxidase Neighboring gene NEDD4-like E3 ubiquitin-protein ligase WWP1 Neighboring gene uncharacterized LOC105501635 Neighboring gene discoidin, CUB and LCCL domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012121043.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012121043.1 Reference Cang.pa_1.0

    Range
    12215262..12268422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011927650.1 → XP_011783040.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    See identical proteins and their annotated locations for XP_011783040.1

    UniProtKB/TrEMBL
    A0A2K5JIM7
    Related
    ENSCANP00000028679.1, ENSCANT00000051762.1
    Conserved Domains (1) summary
    pfam00777
    Location:85 → 329
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_011927651.1 → XP_011783041.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X3

    See identical proteins and their annotated locations for XP_011783041.1

    Related
    ENSCANP00000028691.1, ENSCANT00000051772.1
    Conserved Domains (1) summary
    pfam00777
    Location:23 → 238
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_011927652.1 → XP_011783042.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    See identical proteins and their annotated locations for XP_011783042.1

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 185
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_011927649.1 → XP_011783039.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2K5JIM7
    Conserved Domains (1) summary
    pfam00777
    Location:131 → 353
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_011927653.1 → XP_011783043.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X4

    See identical proteins and their annotated locations for XP_011783043.1

    Conserved Domains (1) summary
    pfam00777
    Location:1 → 185
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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