U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NCAM1 neural cell adhesion molecule 1 [ Colobus angolensis palliatus ]

Gene ID: 105501034, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
NCAM1
Gene description
neural cell adhesion molecule 1
See related
Ensembl:ENSCANG00000043881
Gene type
protein coding
RefSeq status
MODEL
Organism
Colobus angolensis palliatus (sub-species: palliatus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NCAM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012120709.1 (19423902..19738105)

NW_012120709.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L23a-like Neighboring gene uncharacterized LOC105501032 Neighboring gene uncharacterized LOC105501036 Neighboring gene uncharacterized LOC105501033 Neighboring gene tetratricopeptide repeat domain 12 Neighboring gene ankyrin repeat and kinase domain containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012120709.1 Unplaced Scaffold Reference Cang.pa_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
neural cell adhesion molecule 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cang.pa_1.0

Genomic

  1. NW_012120709.1 Reference Cang.pa_1.0

    Range
    19423902..19738105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011926756.1 → XP_011782146.1  neural cell adhesion molecule 1 isoform X1

    Conserved Domains (9) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 412
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:428 → 496
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:508 → 605
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:647 → 728
    fn3; Fibronectin type III domain
    pfam15727
    Location:941 → 1153
    DUF4678; Domain of unknown function (DUF4678)
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  2. XM_011926757.1 → XP_011782147.1  neural cell adhesion molecule 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K5KH16, A0A2K5KH26
    Related
    ENSCANP00000040390.1, ENSCANT00000063655.1
    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 412
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:428 → 496
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:508 → 605
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:613 → 694
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  3. XM_011926758.1 → XP_011782148.1  neural cell adhesion molecule 1 isoform X3

    UniProtKB/TrEMBL
    A0A2K5KH30
    Related
    ENSCANP00000040394.1, ENSCANT00000063659.1
    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 402
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:418 → 486
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:498 → 595
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:603 → 684
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  4. XM_011926759.1 → XP_011782149.1  neural cell adhesion molecule 1 isoform X4

    UniProtKB/TrEMBL
    A0A2K5KH25, A0A2K5KH28
    Related
    ENSCANP00000040391.1, ENSCANT00000063656.1
    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 402
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:418 → 486
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:498 → 595
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:638 → 719
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  5. XM_011926761.1 → XP_011782151.1  neural cell adhesion molecule 1 isoform X6

    UniProtKB/TrEMBL
    A0A2K5KH25
    Related
    ENSCANP00000040397.1, ENSCANT00000063662.1
    Conserved Domains (8) summary
    cd05865
    Location:20 → 115
    Ig1_NCAM-1; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-1
    cd05869
    Location:306 → 402
    Ig5_NCAM-1; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00408
    Location:418 → 486
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:222 → 304
    IG_like; Immunoglobulin like
    cd00063
    Location:498 → 595
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:21 → 112
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:603 → 684
    fn3; Fibronectin type III domain
    cl11960
    Location:211 → 307
    Ig; Immunoglobulin domain

  6. XM_011926760.1 → XP_011782150.1  neural cell adhesion molecule 1 isoform X5

    See identical proteins and their annotated locations for XP_011782150.1

    UniProtKB/TrEMBL
    A0A2K5KH30
    Conserved Domains (6) summary
    cd05869
    Location:188 → 284
    Ig_NCAM-1; Immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-1 (NCAM)
    smart00410
    Location:6 → 72
    IG_like; Immunoglobulin like
    cd00063
    Location:380 → 477
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:485 → 566
    fn3; Fibronectin type III domain
    pfam13927
    Location:293 → 365
    Ig_3; Immunoglobulin domain
    cl11960
    Location:93 → 189
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.