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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105495599, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
See related
Ensembl:ENSMNEG00000044906
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010579.1 (303038..546755)

NW_012010579.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 4, mitochondrial pseudogene Neighboring gene uncharacterized LOC105495562 Neighboring gene uncharacterized LOC105495611 Neighboring gene 60S ribosomal protein L17-like Neighboring gene uncharacterized LOC105495642

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010579 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010579.1 Reference Mnem_1.0

    Range
    303038..546755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011765349.1 → XP_011763651.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X2

    Conserved Domains (2) summary
    cd07036
    Location:76 → 242
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    pfam02780
    Location:263 → 318
    Transketolase_C; Transketolase, C-terminal domain

  2. XM_011765343.1 → XP_011763645.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011763645.1

    UniProtKB/TrEMBL
    A0A2K6E918, A0A2K6E932
    Related
    ENSMNEP00000044677.1, ENSMNET00000069188.1
    Conserved Domains (3) summary
    cd07036
    Location:76 → 242
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    PTZ00182
    Location:39 → 391
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
    pfam02780
    Location:263 → 382
    Transketolase_C; Transketolase, C-terminal domain

  3. XM_011765348.1 → XP_011763650.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011763650.1

    UniProtKB/TrEMBL
    A0A2K6E918, A0A2K6E932
    Related
    ENSMNEP00000044675.1, ENSMNET00000069186.1
    Conserved Domains (3) summary
    cd07036
    Location:76 → 242
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    PTZ00182
    Location:39 → 391
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
    pfam02780
    Location:263 → 382
    Transketolase_C; Transketolase, C-terminal domain

  4. XM_011765353.2 → XP_011763655.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X3

    Conserved Domains (2) summary
    cd07036
    Location:76 → 242
    TPP_PYR_E1-PDHc-beta_like; Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins
    pfam02780
    Location:263 → 318
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
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