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FCN3 ficolin 3 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105494534, updated on 13-Mar-2024

Summary

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Gene symbol
FCN3
Gene description
ficolin 3
See related
Ensembl:ENSMNEG00000038862
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human all
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Genomic context

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See FCN3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011688.1 (6006739..6018285, complement)

NW_012011688.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin like 1 Neighboring gene mitogen-activated protein kinase kinase kinase 6 Neighboring gene CD164 molecule like 2 Neighboring gene G protein-coupled receptor 3 Neighboring gene WASP family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011688 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ficolin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011688.1 Reference Mnem_1.0

    Range
    6006739..6018285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011763037.1 → XP_011761339.1  ficolin-3 isoform X1

    UniProtKB/TrEMBL
    A0A2K6D4K5, A0A2K6D4Q1, A0A2K6D4Q3
    Related
    ENSMNEP00000030863.1, ENSMNET00000055286.1
    Conserved Domains (1) summary
    cd00087
    Location:90 → 299
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

  2. XM_011763039.1 → XP_011761341.1  ficolin-3 isoform X2

    See identical proteins and their annotated locations for XP_011761341.1

    Conserved Domains (1) summary
    cd00087
    Location:20 → 229
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

  3. XM_011763038.1 → XP_011761340.1  ficolin-3 isoform X2

    See identical proteins and their annotated locations for XP_011761340.1

    Conserved Domains (1) summary
    cd00087
    Location:20 → 229
    FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
Nucleotide Protein
Heading Accession and Version

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