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PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105492738, updated on 13-Mar-2024

Summary

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Gene symbol
PLOD3
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
See related
Ensembl:ENSMNEG00000036923
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PLOD3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011478.1 (194081..205803, complement)

NW_012011478.1Genomic Context describing neighboring genes Neighboring gene monoacylglycerol O-acyltransferase 3 Neighboring gene 40S ribosomal protein SA-like Neighboring gene zinc finger HIT-type containing 1 Neighboring gene claudin 15 Neighboring gene fission, mitochondrial 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011478 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011478.1 Reference Mnem_1.0

    Range
    194081..205803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011759976.1 → XP_011758278.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X1

    See identical proteins and their annotated locations for XP_011758278.1

    UniProtKB/TrEMBL
    A0A2K6CTY9, A0A2K6CTZ1
    Related
    ENSMNEP00000027139.1, ENSMNET00000051429.1
    Conserved Domains (1) summary
    smart00702
    Location:572 → 735
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_011759977.2 → XP_011758279.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X2

    UniProtKB/TrEMBL
    A0A2K6CTY9
    Conserved Domains (1) summary
    smart00702
    Location:572 → 716
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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