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SORD sorbitol dehydrogenase [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105491132, updated on 19-Jun-2024

Summary

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Gene symbol
SORD
Gene description
sorbitol dehydrogenase
See related
Ensembl:ENSMNEG00000007912
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SORD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010577.1 (29027353..29072458, complement)

NW_012010577.1Genomic Context describing neighboring genes Neighboring gene dual oxidase maturation factor 2 Neighboring gene dual oxidase 2 Neighboring gene 14-3-3 protein zeta/delta pseudogene Neighboring gene uncharacterized LOC105491121 Neighboring gene U1 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene telomere repeat binding bouquet formation protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010577 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-iditol 2-dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sorbitol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbitol dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010577.1 Reference Mnem_1.0

    Range
    29027353..29072458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011757294.2 → XP_011755596.1  sorbitol dehydrogenase isoform X1

    UniProtKB/TrEMBL
    A0A2K6ARI4, A0A2K6ARI9
    Related
    ENSMNEP00000001758.1, ENSMNET00000008654.1
    Conserved Domains (2) summary
    cd05285
    Location:11 → 350
    sorbitol_DH; Sorbitol dehydrogenase
    PLN02702
    Location:2 → 347
    PLN02702; L-idonate 5-dehydrogenase

  2. XM_011757298.1 → XP_011755600.1  sorbitol dehydrogenase isoform X2

    UniProtKB/TrEMBL
    A0A2K6ARI9
    Conserved Domains (2) summary
    cd05285
    Location:9 → 325
    sorbitol_DH; Sorbitol dehydrogenase
    COG1063
    Location:8 → 324
    Tdh; Threonine dehydrogenase or related Zn-dependent dehydrogenase [Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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