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GTPBP4 GTP binding protein 4 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105490812, updated on 13-Mar-2024

Summary

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Gene symbol
GTPBP4
Gene description
GTP binding protein 4
See related
Ensembl:ENSMNEG00000044366
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GTPBP4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011300.1 (4422709..4452395, complement)

NW_012011300.1Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene isopentenyl-diphosphate delta-isomerase 2-like Neighboring gene isopentenyl-diphosphate delta isomerase 1 Neighboring gene uncharacterized LOC105490811 Neighboring gene tubulin-folding cofactor B pseudogene Neighboring gene La ribonucleoprotein 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011300 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar GTP-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011300.1 Reference Mnem_1.0

    Range
    4422709..4452395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011756718.2 → XP_011755020.1  nucleolar GTP-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2K6E5D5
    Related
    ENSMNEP00000043374.1, ENSMNET00000067882.1
    Conserved Domains (3) summary
    cd01897
    Location:169 → 330
    NOG; Nucleolar GTP-binding protein (NOG)
    COG1084
    Location:5 → 301
    Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
    pfam08155
    Location:366 → 416
    NOGCT; NOGCT (NUC087) domain

  2. XM_011756717.2 → XP_011755019.1  nucleolar GTP-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6E5C8
    Related
    ENSMNEP00000043367.1, ENSMNET00000067875.1
    Conserved Domains (3) summary
    cd01897
    Location:169 → 340
    NOG; Nucleolar GTP-binding protein (NOG)
    COG1084
    Location:5 → 345
    Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
    pfam08155
    Location:396 → 446
    NOGCT; NOGCT (NUC087) domain

  3. XM_011756719.1 → XP_011755021.1  nucleolar GTP-binding protein 1 isoform X3

    Conserved Domains (3) summary
    cd01897
    Location:122 → 293
    NOG; Nucleolar GTP-binding protein (NOG)
    TIGR00231
    Location:121 → 284
    small_GTP; small GTP-binding protein domain
    pfam08155
    Location:349 → 399
    NOGCT; NOGCT (NUC087) domain

  4. XM_011756720.1 → XP_011755022.1  nucleolar GTP-binding protein 1 isoform X4

    Conserved Domains (3) summary
    cd01897
    Location:53 → 224
    NOG; Nucleolar GTP-binding protein (NOG)
    TIGR00231
    Location:52 → 215
    small_GTP; small GTP-binding protein domain
    pfam08155
    Location:280 → 330
    NOGCT; NOGCT (NUC087) domain
Nucleotide Protein
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