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HACD1 3-hydroxyacyl-CoA dehydratase 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105488227, updated on 13-Mar-2024

Summary

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Gene symbol
HACD1
Gene description
3-hydroxyacyl-CoA dehydratase 1
See related
Ensembl:ENSMNEG00000041635
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HACD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012011045.1 (2501821..2540542, complement)

NW_012011045.1Genomic Context describing neighboring genes Neighboring gene bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] pseudogene Neighboring gene pre-mRNA-splicing factor 38A pseudogene Neighboring gene signal transducing adaptor molecule Neighboring gene transmembrane protein 236

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012011045 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012011045.1 Reference Mnem_1.0

    Range
    2501821..2540542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011752095.2 → XP_011750397.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6DMH3, A0A2K6DMH6
    Related
    ENSMNEP00000037103.1, ENSMNET00000061570.1
    Conserved Domains (1) summary
    pfam04387
    Location:119 → 278
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_024794874.1 → XP_024650642.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X2

    Conserved Domains (1) summary
    pfam04387
    Location:26 → 185
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
Heading Accession and Version

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