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UMOD uromodulin [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105485050, updated on 13-Mar-2024

Summary

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Gene symbol
UMOD
Gene description
uromodulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See UMOD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010801.1 (1018192..1043269, complement)

NW_012010801.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein E pseudogene Neighboring gene glycoprotein 2 Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene uncharacterized LOC105484981 Neighboring gene acyl-CoA synthetase medium chain family member 5 Neighboring gene uncharacterized LOC105484983

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010801 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010801.1 Reference Mnem_1.0

    Range
    1018192..1043269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024793892.1 → XP_024649660.1  LOW QUALITY PROTEIN: uromodulin

    UniProtKB/TrEMBL
    A0A2K6DJQ6
    Conserved Domains (4) summary
    smart00241
    Location:328 → 578
    ZP; Zona pellucida (ZP) domain
    cd00054
    Location:108 → 149
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:65 → 103
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:35 → 63
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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