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SGCD sarcoglycan delta [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105482381, updated on 13-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
See related
Ensembl:ENSMNEG00000029859
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012019465.1 (4260902..5303501, complement)

NW_012019465.1Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit MIC26 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC105482383 Neighboring gene uncharacterized LOC105482384 Neighboring gene uncharacterized LOC105482385

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012019465 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012019465.1 Reference Mnem_1.0

    Range
    4260902..5303501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011742435.2 → XP_011740737.1  delta-sarcoglycan isoform X2

    See identical proteins and their annotated locations for XP_011740737.1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_024792975.1 → XP_024648743.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_011742434.2 → XP_011740736.1  delta-sarcoglycan isoform X2

    See identical proteins and their annotated locations for XP_011740736.1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_011742432.1 → XP_011740734.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_011740734.1

    UniProtKB/TrEMBL
    A0A2K6BHL8
    Related
    ENSMNEP00000010944.1, ENSMNET00000035125.1
    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  5. XM_011742433.1 → XP_011740735.1  delta-sarcoglycan isoform X2

    See identical proteins and their annotated locations for XP_011740735.1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  6. XM_011742437.2 → XP_011740739.1  delta-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam04790
    Location:29 → 238
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  7. XM_011742431.1 → XP_011740733.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_011740733.1

    UniProtKB/TrEMBL
    A0A2K6BHL8
    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  8. XM_024792974.1 → XP_024648742.1  delta-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A2K6BHL8
    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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