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GMPPB GDP-mannose pyrophosphorylase B [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105480447, updated on 13-Mar-2024

Summary

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Gene symbol
GMPPB
Gene description
GDP-mannose pyrophosphorylase B
See related
Ensembl:ENSMNEG00000040699
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See GMPPB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012018354.1 (20541577..20544048, complement)

NW_012018354.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 123 Neighboring gene macrophage stimulating 1 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene PHD finger-like domain-containing protein 5A pseudogene Neighboring gene cadherin related family member 4 Neighboring gene ubiquitin like modifier activating enzyme 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012018354 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannose-1-phosphate guanylyltransferase (GTP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-1-phosphate guanyltransferase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012018354.1 Reference Mnem_1.0

    Range
    20541577..20544048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011739345.1 → XP_011737647.1  mannose-1-phosphate guanyltransferase beta isoform X2

    See identical proteins and their annotated locations for XP_011737647.1

    UniProtKB/TrEMBL
    A0A2K6DGV0, A0A2K6DGW7
    Related
    ENSMNEP00000035141.1, ENSMNET00000059595.1
    Conserved Domains (3) summary
    cd06425
    Location:1 → 233
    M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
    COG1208
    Location:1 → 352
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]
    cl00160
    Location:255 → 334
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  2. XM_011739344.1 → XP_011737646.1  mannose-1-phosphate guanyltransferase beta isoform X1

    See identical proteins and their annotated locations for XP_011737646.1

    UniProtKB/TrEMBL
    A0A2K6DGS3, A0A2K6DGV0
    Related
    ENSMNEP00000035125.1, ENSMNET00000059580.1
    Conserved Domains (3) summary
    cd06425
    Location:1 → 233
    M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
    COG1208
    Location:1 → 379
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]
    cl00160
    Location:255 → 361
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  3. XM_011739346.1 → XP_011737648.1  mannose-1-phosphate guanyltransferase beta isoform X3

    See identical proteins and their annotated locations for XP_011737648.1

    UniProtKB/TrEMBL
    A0A2K6DGV0
    Conserved Domains (3) summary
    cd06425
    Location:1 → 178
    M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
    COG1208
    Location:14 → 297
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]
    cl00160
    Location:200 → 279
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
Nucleotide Protein
Heading Accession and Version

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