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C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105475564, updated on 14-Nov-2024

Summary

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Gene symbol
C1GALT1
Gene description
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
See related
Ensembl:ENSMNEG00000029681
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See C1GALT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012016132.1 (32819377..32917113)

NW_012016132.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 655-like Neighboring gene uncharacterized LOC112425511 Neighboring gene putative endogenous retrovirus group FC1 Env polyprotein Neighboring gene uncharacterized LOC112425519 Neighboring gene collagen type XXVIII alpha 1 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012016132 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in core 1 O-glycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012016132.1 Reference Mnem_1.0

    Range
    32819377..32917113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011730925.1 → XP_011729227.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_011729227.1

    UniProtKB/TrEMBL
    A0A2K6BGM6
    Related
    ENSMNEP00000010553.1, ENSMNET00000034733.1
    Conserved Domains (1) summary
    cl21608
    Location:115 → 229
    Galactosyl_T; Galactosyltransferase

  2. XM_011730929.2 → XP_011729231.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    See identical proteins and their annotated locations for XP_011729231.1

    Conserved Domains (1) summary
    cl21608
    Location:107 → 221
    Galactosyl_T; Galactosyltransferase

  3. XM_011730926.2 → XP_011729228.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    See identical proteins and their annotated locations for XP_011729228.1

    Conserved Domains (1) summary
    cl21608
    Location:107 → 221
    Galactosyl_T; Galactosyltransferase

  4. XM_011730923.2 → XP_011729225.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011729225.1

    Conserved Domains (1) summary
    cl21608
    Location:127 → 268
    Galactosyl_T; Galactosyltransferase

  5. XM_011730922.2 → XP_011729224.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011729224.1

    Conserved Domains (1) summary
    cl21608
    Location:127 → 268
    Galactosyl_T; Galactosyltransferase

  6. XM_011730924.2 → XP_011729226.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011729226.1

    Conserved Domains (1) summary
    cl21608
    Location:127 → 268
    Galactosyl_T; Galactosyltransferase

  7. XM_011730930.2 → XP_011729232.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X4

    Conserved Domains (1) summary
    cl21608
    Location:127 → 268
    Galactosyl_T; Galactosyltransferase

  8. XM_011730928.1 → XP_011729230.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X3

    See identical proteins and their annotated locations for XP_011729230.1

    Conserved Domains (1) summary
    cl21608
    Location:107 → 221
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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