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EHD1 EH domain containing 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105469537, updated on 13-Mar-2024

Summary

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Gene symbol
EHD1
Gene description
EH domain containing 1
See related
Ensembl:ENSMNEG00000031673
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See EHD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012013911.1 (3480853..3508571, complement)

NW_012013911.1Genomic Context describing neighboring genes Neighboring gene menin 1 Neighboring gene CDC42 binding protein kinase gamma Neighboring gene uncharacterized LOC112424563 Neighboring gene uncharacterized LOC105469539 Neighboring gene autophagy related 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012013911 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in clathrin-coated pit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012013911.1 Reference Mnem_1.0

    Range
    3480853..3508571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011720710.1 → XP_011719012.1  EH domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011719012.1

    UniProtKB/TrEMBL
    A0A2K6BUJ4
    Related
    ENSMNEP00000015081.1, ENSMNET00000039288.1
    Conserved Domains (3) summary
    smart00027
    Location:452 → 545
    EH; Eps15 homology domain
    cd09913
    Location:74 → 314
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:39 → 70
    EHD_N; N-terminal EH-domain containing protein

  2. XM_011720712.1 → XP_011719014.1  EH domain-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011719014.1

    UniProtKB/TrEMBL
    A0A2K6BUK3
    Conserved Domains (4) summary
    smart00027
    Location:438 → 531
    EH; Eps15 homology domain
    cd09913
    Location:60 → 300
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:24 → 56
    EHD_N; N-terminal EH-domain containing protein
    pfam18150
    Location:288 → 394
    DUF5600; Domain of unknown function (DUF5600)

  3. XM_011720713.1 → XP_011719015.1  EH domain-containing protein 1 isoform X2

    See identical proteins and their annotated locations for XP_011719015.1

    UniProtKB/TrEMBL
    A0A2K6BUK3
    Related
    ENSMNEP00000015091.1, ENSMNET00000039298.1
    Conserved Domains (4) summary
    smart00027
    Location:438 → 531
    EH; Eps15 homology domain
    cd09913
    Location:60 → 300
    EHD; Eps15 homology domain (EHD), C-terminal domain
    pfam16880
    Location:24 → 56
    EHD_N; N-terminal EH-domain containing protein
    pfam18150
    Location:288 → 394
    DUF5600; Domain of unknown function (DUF5600)
Nucleotide Protein
Heading Accession and Version

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