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RAB30 RAB30, member RAS oncogene family [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105468830, updated on 13-Mar-2024

Summary

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Gene symbol
RAB30
Gene description
RAB30, member RAS oncogene family
See related
Ensembl:ENSMNEG00000037406
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See RAB30 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012013799.1 (14394898..14497219, complement)

NW_012013799.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene prolylcarboxypeptidase Neighboring gene DNA damage induced apoptosis suppressor Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC105468832 Neighboring gene uncharacterized LOC105468949 Neighboring gene PCF11 cleavage and polyadenylation factor subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012013799 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012013799.1 Reference Mnem_1.0

    Range
    14394898..14497219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011719233.2 → XP_011717535.1  ras-related protein Rab-30 isoform X2

    See identical proteins and their annotated locations for XP_011717535.1

    UniProtKB/TrEMBL
    A0A2K6CWI6
    Related
    ENSMNEP00000028019.1, ENSMNET00000052318.1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  2. XM_011719224.2 → XP_011717526.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_011717526.1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  3. XM_011719235.2 → XP_011717537.1  ras-related protein Rab-30 isoform X2

    See identical proteins and their annotated locations for XP_011717537.1

    UniProtKB/TrEMBL
    A0A2K6CWI6
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  4. XM_011719230.2 → XP_011717532.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_011717532.1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  5. XM_011719228.1 → XP_011717530.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_011717530.1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  6. XM_011719227.1 → XP_011717529.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_011717529.1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  7. XM_011719234.2 → XP_011717536.1  ras-related protein Rab-30 isoform X2

    See identical proteins and their annotated locations for XP_011717536.1

    UniProtKB/TrEMBL
    A0A2K6CWI6
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)

  8. XM_024788813.1 → XP_024644581.1  ras-related protein Rab-30 isoform X1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  9. XM_024788814.1 → XP_024644582.1  ras-related protein Rab-30 isoform X1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  10. XM_011719231.2 → XP_011717533.1  ras-related protein Rab-30 isoform X1

    See identical proteins and their annotated locations for XP_011717533.1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  11. XM_024788815.1 → XP_024644583.1  ras-related protein Rab-30 isoform X1

    Conserved Domains (1) summary
    cd04114
    Location:3 → 190
    Rab30; Rab GTPase family 30 (Rab30)

  12. XM_011719232.2 → XP_011717534.1  ras-related protein Rab-30 isoform X2

    See identical proteins and their annotated locations for XP_011717534.1

    UniProtKB/TrEMBL
    A0A2K6CWI6
    Related
    ENSMNEP00000028025.1, ENSMNET00000052326.1
    Conserved Domains (1) summary
    cd04114
    Location:3 → 171
    Rab30; Rab GTPase family 30 (Rab30)
Nucleotide Protein
Heading Accession and Version

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