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ABAT 4-aminobutyrate aminotransferase [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105467801, updated on 18-Sep-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
Ensembl:ENSMNEG00000039929
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012013466.1 (7780276..7829175, complement)

NW_012013466.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105467797 Neighboring gene calcium regulated heat stable protein 1 Neighboring gene phosphomannomutase 2 Neighboring gene transmembrane protein 186 Neighboring gene U7 small nuclear RNA Neighboring gene methyltransferase 22, Kin17 lysine

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012013466 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: 4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012013466.1 Reference Mnem_1.0

    Range
    7780276..7829175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011717525.1 → XP_011715827.1  LOW QUALITY PROTEIN: 4-aminobutyrate aminotransferase, mitochondrial

    UniProtKB/TrEMBL
    A0A2K6DBY6
    Related
    ENSMNEP00000033392.1, ENSMNET00000057838.1
    Conserved Domains (2) summary
    TIGR00699
    Location:44 → 497
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type
    COG0160
    Location:48 → 499
    GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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