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SFTPD surfactant protein D [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105465949, updated on 13-Mar-2024

Summary

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Gene symbol
SFTPD
Gene description
surfactant protein D
See related
Ensembl:ENSMNEG00000033500
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SFTPD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012012911.1 (2429159..2439467)

NW_012012911.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 254 Neighboring gene nuclear nucleic acid-binding protein C1D pseudogene Neighboring gene double homeobox protein 1-like Neighboring gene mannose-binding protein A-like Neighboring gene surfactant protein A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012012911 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pulmonary surfactant-associated protein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012012911.1 Reference Mnem_1.0

    Range
    2429159..2439467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011714609.1 → XP_011712911.1  pulmonary surfactant-associated protein D

    See identical proteins and their annotated locations for XP_011712911.1

    UniProtKB/TrEMBL
    A0A2K6C6J1
    Related
    ENSMNEP00000019254.1, ENSMNET00000043494.1
    Conserved Domains (3) summary
    cd03591
    Location:262 → 375
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:130 → 202
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:224 → 269
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization
Nucleotide Protein
Heading Accession and Version

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