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COLEC12 collectin subfamily member 12 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105464721, updated on 13-Mar-2024

Summary

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Gene symbol
COLEC12
Gene description
collectin subfamily member 12
See related
Ensembl:ENSMNEG00000041994
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See COLEC12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012010634.1 (569497..762534)

NW_012010634.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105464706 Neighboring gene centrin 1 Neighboring gene uncharacterized LOC112423678 Neighboring gene uncharacterized LOC105464717 Neighboring gene THO complex 1 Neighboring gene ubiquitin specific peptidase 14 Neighboring gene Rho associated coiled-coil containing protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012010634 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pattern recognition receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collectin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012010634.1 Reference Mnem_1.0

    Range
    569497..762534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011712757.1 → XP_011711059.1  collectin-12

    UniProtKB/TrEMBL
    A0A2K6DPS5, A0A2K6DPS6
    Related
    ENSMNEP00000037908.1, ENSMNET00000062380.1
    Conserved Domains (2) summary
    cd03590
    Location:607 → 732
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    COG1196
    Location:77 → 350
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version

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