U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

XYLT1 xylosyltransferase 1 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105464267, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
XYLT1
Gene description
xylosyltransferase 1
See related
Ensembl:ENSMNEG00000030085
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See XYLT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012012688.1 (546782..918497)

NW_012012688.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105464263 Neighboring gene uncharacterized LOC105464265 Neighboring gene uncharacterized LOC105464264 Neighboring gene uncharacterized LOC112423580 Neighboring gene uncharacterized LOC105464269 Neighboring gene UPF0454 protein C12orf49-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012012688 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012012688.1 Reference Mnem_1.0

    Range
    546782..918497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011711985.2 → XP_011710287.1  LOW QUALITY PROTEIN: xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A2K6BJC8
    Related
    ENSMNEP00000011502.1, ENSMNET00000035685.1
    Conserved Domains (2) summary
    pfam02485
    Location:328 → 580
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:613 → 793
    Xylo_C; Xylosyltransferase C terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.