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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Macaca nemestrina (pig-tailed macaque) ]

Gene ID: 105463809, updated on 13-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
See related
Ensembl:ENSMNEG00000029083
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca nemestrina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Mnem_1.0 (GCF_000956065.1) Unplaced Scaffold NW_012012544.1 (490866..617145)

NW_012012544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105463807 Neighboring gene coiled-coil domain containing 77 Neighboring gene coiled-coil domain-containing protein 77-like Neighboring gene U7 small nuclear RNA Neighboring gene ninjurin 2 Neighboring gene uncharacterized LOC105463810

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012012544 Unplaced Scaffold Reference Mnem_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca nemestrina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnem_1.0

Genomic

  1. NW_012012544.1 Reference Mnem_1.0

    Range
    490866..617145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011711130.2 → XP_011709432.2  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A2K6BCX5
    Related
    ENSMNEP00000009247.1, ENSMNET00000033418.1
    Conserved Domains (3) summary
    pfam07691
    Location:143 → 277
    PA14; PA14 domain
    cl11394
    Location:787 → 983
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl26464
    Location:415 → 551
    Atrophin-1; Atrophin-1 family

  2. XM_011711129.2 → XP_011709431.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1

    Conserved Domains (2) summary
    pfam07691
    Location:143 → 277
    PA14; PA14 domain
    cl11394
    Location:786 → 982
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_011711131.2 → XP_011709433.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X3

    See identical proteins and their annotated locations for XP_011709433.1

    Conserved Domains (2) summary
    pfam07691
    Location:49 → 183
    PA14; PA14 domain
    cl11394
    Location:693 → 889
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RNA

  1. XR_003013964.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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