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for cGMP-dependent protein kinase for [ Pogonomyrmex barbatus (red harvester ant) ]

Gene ID: 105427696, updated on 10-Oct-2024

Summary

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Gene symbol
for
Gene description
cGMP-dependent protein kinase for
See related
EnsemblRapid:LOC105427696
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogonomyrmex barbatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Pogonomyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See for in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Pbar_UMD_V03 (GCF_000187915.1) Unplaced Scaffold NW_011933670.1 (37291..78685, complement)

NW_011933670.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105427698 Neighboring gene general transcriptional corepressor trfA-like Neighboring gene Argonaute 3 Neighboring gene protein TAPT1 homolog Neighboring gene lethal (2) 41Ab Neighboring gene uroporphyrinogen decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011933670 Unplaced Scaffold Reference Pbar_UMD_V03

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cGMP-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B; cGMP-dependent protein kinase, isozyme 2 forms cD5/T2
Names
cGMP-protein kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogonomyrmex barbatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pbar_UMD_V03

Genomic

  1. NW_011933670.1 Reference Pbar_UMD_V03

    Range
    37291..78685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011639560.2 → XP_011637862.1  cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B isoform X3

    UniProtKB/TrEMBL
    A0A6I9X0S3
    Related
    XP_011637862.1, XM_011639560.2
    Conserved Domains (5) summary
    PTZ00263
    Location:359 → 664
    PTZ00263; protein kinase A catalytic subunit; Provisional
    cd12086
    Location:4 → 53
    DD_cGKI-beta; Dimerization/Docking domain of Cyclic GMP-dependent Protein Kinase I beta
    COG0664
    Location:123 → 207
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    cd00038
    Location:107 → 216
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd05572
    Location:369 → 629
    STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)

  2. XM_011639559.2 → XP_011637861.1  cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 isoform X2

    UniProtKB/TrEMBL
    A0A6I9W7X0
    Related
    XP_011637861.1, XM_011639559.2
    Conserved Domains (5) summary
    PTZ00263
    Location:368 → 673
    PTZ00263; protein kinase A catalytic subunit; Provisional
    smart00133
    Location:632 → 675
    S_TK_X; Extension to Ser/Thr-type protein kinases
    COG0664
    Location:228 → 373
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    cd00038
    Location:234 → 350
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd05572
    Location:378 → 638
    STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)

  3. XM_011639558.2 → XP_011637860.1  cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B isoform X1

    UniProtKB/TrEMBL
    A0A6I9WF86
    Related
    XP_011637860.1, XM_011639558.2
    Conserved Domains (5) summary
    PTZ00263
    Location:461 → 766
    PTZ00263; protein kinase A catalytic subunit; Provisional
    cd12083
    Location:108 → 155
    DD_cGKI; Dimerization/Docking domain of Cyclic GMP-dependent Protein Kinase I
    COG0664
    Location:321 → 466
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    cd00038
    Location:209 → 318
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd05572
    Location:471 → 731
    STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)
Nucleotide Protein
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