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LOC105424126 dnaJ homolog subfamily B member 6-like [ Pogonomyrmex barbatus (red harvester ant) ]

Gene ID: 105424126, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105424126
Gene description
dnaJ homolog subfamily B member 6-like
See related
EnsemblRapid:LOC105424126
Gene type
protein coding
RefSeq status
MODEL
Organism
Pogonomyrmex barbatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Pogonomyrmex
Orthologs
honey bee all
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Genomic context

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See LOC105424126 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Pbar_UMD_V03 (GCF_000187915.1) Unplaced Scaffold NW_011933550.1 (391417..400128, complement)

NW_011933550.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA helicase hay Neighboring gene Acyl-CoA binding protein 1 Neighboring gene Actin-related protein 2/3 complex, subunit 4 Neighboring gene Nuclear factor I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011933550 Unplaced Scaffold Reference Pbar_UMD_V03

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6-B-like; dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pogonomyrmex barbatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pbar_UMD_V03

Genomic

  1. NW_011933550.1 Reference Pbar_UMD_V03

    Range
    391417..400128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011634189.1 → XP_011632491.1  dnaJ homolog subfamily B member 6-like isoform X2

    See identical proteins and their annotated locations for XP_011632491.1

    UniProtKB/TrEMBL
    A0A6I9W270
    Related
    XP_011632491.1, XM_011634189.1
    Conserved Domains (2) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  2. XM_011634187.1 → XP_011632489.1  dnaJ homolog subfamily B member 6-B-like isoform X1

    See identical proteins and their annotated locations for XP_011632489.1

    UniProtKB/TrEMBL
    A0A6I9WL47
    Related
    XP_011632489.1, XM_011634187.1
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  3. XM_011634188.2 → XP_011632490.1  dnaJ homolog subfamily B member 6-B-like isoform X1

    See identical proteins and their annotated locations for XP_011632490.1

    UniProtKB/TrEMBL
    A0A6I9WL47
    Related
    XP_011632490.1, XM_011634188.2
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  4. XM_011634190.2 → XP_011632492.1  dnaJ homolog subfamily B member 6-like isoform X2

    See identical proteins and their annotated locations for XP_011632492.1

    UniProtKB/TrEMBL
    A0A6I9W270
    Related
    XP_011632492.1, XM_011634190.2
    Conserved Domains (2) summary
    COG0484
    Location:2 → 108
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

RNA

  1. XR_967493.1 RNA Sequence

    Related
    XR_967493.1
Nucleotide Protein
Heading Accession and Version

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