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LOC105378269 uncharacterized LOC105378269 [ Homo sapiens (human) ]

Gene ID: 105378269, updated on 10-Oct-2023

Summary

Gene symbol
LOC105378269
Gene description
uncharacterized LOC105378269
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105378269 in Genome Data Viewer
Location:
10q11.21
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (42755142..42769621)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (43632611..43647099)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (43250590..43265069)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene Ras suppressor protein 1 pseudogene 1 Neighboring gene uncharacterized LOC283028 Neighboring gene double homeobox A pseudogene 3 Neighboring gene Sharpr-MPRA regulatory region 13348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43264750-43265250 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43265251-43265751 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3281 Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene small nucleolar RNA U13 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:43311987-43312910 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:43322605-43323486 Neighboring gene RNA, U6 small nuclear 885, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134498.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL022344, BM682592

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    42755142..42769621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    43632611..43647099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)