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LOC105377687 uncharacterized LOC105377687 [ Homo sapiens (human) ]

Gene ID: 105377687, updated on 17-Sep-2024

Summary

Gene symbol
LOC105377687
Gene description
uncharacterized LOC105377687
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC105377687 in Genome Data Viewer
Location:
5q33.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (159698588..159705348, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (160227034..160233782, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901123 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:158936934-158937434 Neighboring gene uncharacterized LOC105377685 Neighboring gene uncharacterized LOC105377684 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23550 Neighboring gene uncharacterized LOC105377688 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:159200044-159200558 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:159200559-159201071 Neighboring gene NANOG hESC enhancer GRCh37_chr5:159201487-159201994 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:159205410-159206609 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16573 Neighboring gene long intergenic non-protein coding RNA 1847 Neighboring gene adrenoceptor alpha 1B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    159698588..159705348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_941144.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    160227034..160233782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076049.1 RNA Sequence