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LOC105377641 endogenous retrovirus group PABLB member 1 Env polyprotein [ Homo sapiens (human) ]

Gene ID: 105377641, discontinued on 23-Feb-2021
  • This record has been withdrawn by NCBI. This record corresponds to partial endogenous retrovirus sequence which is not sufficient evidence to define a distinct gene.

Summary

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Gene symbol
LOC105377641
Gene description
endogenous retrovirus group PABLB member 1 Env polyprotein
Gene type
protein coding
RefSeq status
WITHDRAWN
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
DISCONTINUED: This record has been withdrawn by NCBI. This record corresponds to partial endogenous retrovirus sequence which is not sufficient evidence to define a distinct gene.
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105377641 in Genome Data Viewer
Location:
3p24.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20201120 latest, but not current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (16724265..16773310)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General protein information

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Names
endogenous retrovirus group PABLB member 1 Env polyprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    16724265..16773310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024453866.1 → XP_024309634.1  

  2. XM_024453864.1 → XP_024309632.1  

  3. XM_024453865.1 → XP_024309633.1  

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_017363813.1 Reference GRCh38.p13 PATCHES

    Range
    36755..85800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017007613.2 → XP_016863102.1  

  2. XM_017007614.2 → XP_016863103.1  

  3. XM_017007612.2 → XP_016863101.1  

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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