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LINC02263 long intergenic non-protein coding RNA 2263 [ Homo sapiens (human) ]

Gene ID: 105377390, updated on 10-Oct-2023

Summary

Official Symbol
LINC02263provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2263provided by HGNC
Primary source
HGNC:HGNC:53175
See related
Ensembl:ENSG00000228358 AllianceGenome:HGNC:53175
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02263 in Genome Data Viewer
Location:
4q26
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (117360652..117372849)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (120662866..120675053)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (118281808..118294005)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377388 Neighboring gene NANOG hESC enhancer GRCh37_chr4:118045000-118045508 Neighboring gene translocation associated membrane protein 1 like 1 Neighboring gene long intergenic non-protein coding RNA 2262 Neighboring gene long intergenic non-protein coding RNA 1378 Neighboring gene ribosomal protein SA pseudogene 35 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:118477807-118478308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:118478309-118478808 Neighboring gene NT5C3A pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147152.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC113617
    Related
    ENST00000666918.1
  2. NR_147153.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC113617, BX105791, DB468453
    Related
    ENST00000426240.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    117360652..117372849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    120662866..120675053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)