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LOC105376938 uncharacterized LOC105376938 [ Homo sapiens (human) ]

Gene ID: 105376938, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105376938
Gene description
uncharacterized LOC105376938
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in urinary bladder (RPKM 1.8), fat (RPKM 0.4) and 3 other tissues See more
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Genomic context

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Location:
3p26.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (5691054..5699365, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (5684805..5693186, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376936 Neighboring gene mitochondrial ribosomal protein S35 pseudogene 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:5605144-5606343 Neighboring gene uncharacterized LOC105376939 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:5740332-5741531 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19388 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr3:5751477-5751976 Neighboring gene uncharacterized LOC105376940 Neighboring gene Sharpr-MPRA regulatory region 12048 Neighboring gene uncharacterized LOC105376941

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    5691054..5699365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_940570.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    5684805..5693186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007073285.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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